Joe vehicles move out from Joe Headquarters to meet the Cobra mothership. Joes assault Cobra leaders on the ship from above and below. After a brief flashback to the original opening sequence, the battle continues as Flint stops Cobra Commander from firing at Lady Jaye, and a bomb planted by Airtight destroys the ship. In the last shot, Joes run from the explosion and pose in front of a US flag backdrop.
| Characters
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| Bazooka | 13 seconds | (silent) | in Armadillo, grappling onto airship, running from the wreckage, in final pose
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| Flint | 12 seconds | (silent) | giving battle cry, throwing Cobra Cmdr, running from the wreckage, in final pose
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| Alpine | 11 seconds | (silent) | in Armadillo, grappling onto airship, running from the wreckage, in final pose
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| Snake Eyes | 9 seconds | | riding Sky Hawk, punching Tomax, in final pose
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| Airtight | 9 seconds | (silent) | planting a bomb, running from the wreckage, in Skystriker in final pose
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| Gung-Ho | 9 seconds | (silent) | on battlefield in flashback, in final pose
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| Lady Jaye | 9 seconds | (silent) | fighting Cobras on airship, running from the wreckage, in final pose
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| Quick Kick | 9 seconds | (silent) | riding Sky Hawk, punching Tomax, in final pose
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| Breaker | 8 seconds | (silent) | on battlefield in flashback, on Skystriker in final pose
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| Footloose | 8 seconds | (silent) | catching Destro, in final pose
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| Dusty | 7 seconds | (silent) | flying a Sky Hawk, launching a bazooka, on Skystriker in final pose
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| Cobra Commander | 6 seconds | (silent) | in airship, aiming at Lady Jaye, thrown through window by Flint
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| Destro | 6 seconds | (silent) | thrown from airship turret, tossed around and onto Dreadnoks
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| Shipwreck | 6 seconds | (silent) | flying a S.H.A.R.C., in final pose
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| Barbecue | 5 seconds | (silent) | on foot as Joes deploy from HQ, in final pose
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| Duke | 5 seconds | 1 line | on battlefield in flashback
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| Roadblock | 5 seconds | (silent) | catching Destro, in final pose
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| Scarlett | 5 seconds | (silent) | on battlefield in flashback
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| Stalker | 4 seconds | (silent) | landing in J.U.M.P. in flashback
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| Tomax | 3 seconds | (silent) | attacking Quick Kick on airship
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| Xamot | 3 seconds | (silent) | attacking Snake Eyes on airship
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| Ace | 2 seconds | (silent) | flying a Skystriker against Trubble Bubbles (0:06, 0:09)
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| Rock 'n Roll | 2 seconds | (silent) | on battlefield in flashback (0:32-0:33)
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| Short-Fuze | 2 seconds | (silent) | on battlefield in flashback (0:32-0:33)
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| Steeler | 2 seconds | (silent) | on battlefield in flashback (0:32-0:33)
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| Zap | 2 seconds | (silent) | on battlefield in flashback (0:32-0:33)
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| Baroness | 1 second | (silent) | with Cobra Cmdr inside airship (0:08)
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| Buzzer | 1 second | (silent) | falling when Destro is thrown on top of Dreadnoks (0:25)
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| Mutt | 1 second | (silent) | on foot as Joes deploy from HQ (0:05)
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| Ripper | 1 second | (silent) | falling when Destro is thrown on top of Dreadnoks (0:25)
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| Torch | 1 second | (silent) | falling when Destro is thrown on top of Dreadnoks (0:25)
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| Tripwire | 1 second | (silent) | on foot as Joes deploy from HQ (0:05)
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| Wild Weasel | 1 second | (silent) | ejecting from Rattler (0:30)
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| Zartan | 1 second | (silent) | flying a Trubble Bubble (0:07)
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| Troops Appearing
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| Cobra | 4 seconds | | piloting Trubble Bubbles; operating and defending airship
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| Crimson Guard | 1 second | | flying a Trubble Bubble behind Destro (0:16)
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| Greenshirt | 1 second | | driving Alpine and Bazooka's Armadillo (0:05)
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| Vehicles Appearing
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| Skystriker | 11 seconds | | in opening shot, deploying from HQ, flying toward airship, in final pose
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| Armadillo | 8 seconds | | in opening shot, deploying from HQ, driving under airship, in final pose
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| Sky Hawk | 8 seconds | | deploying from HQ, dropping Joes onto airship
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| Rattler | 4 seconds | | pursuing S.H.A.R.C. through trench in airship's surface
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| S.H.A.R.C. | 4 seconds | | flying along trench in airship's surface
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| A.W.E. Striker | 3 seconds | | in opening shot, deploying from HQ
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| Dragonfly | 2 seconds | | deploying from HQ (0:04-0:05)
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| Mauler | 2 seconds | | in opening shot (0:01-0:02)
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| Trubble Bubble | 2 seconds | | attacking ahead of airship; behind Destro (0:07, 0:17)
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| Non-Toy Equipment: Cobra mothership
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